Protein ZmALF6
ZmALF6 is a protein in the Alfin-like family.
Information
TF Name: ZmALF6
Species: Maize
TF Family: Alfin-like
Gene Name(Synonym): ALF6
Uniprot ID: B4FP21
Subgenome: 1

Protein ZmALF6

ZmALF6 is a protein in the Alfin-like family.

Overview of domains present in v5 transcripts
Alfin-likePF00628PF12165
Zm00001eb411150_T002
Zm00001eb411150_T001
Zm00001eb411150_T003
Zm00001eb411150_T004

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d023962DAPseq no logo sequence fimo position
Zm00001d023962DAPseq no logo sequence fimo position
Zm00001d023962ChIPseq no logo sequence fimo position
Zm00001d023962PChIPseq no logo sequence fimo position

Interactions where ZmALF6 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmALF6 is the target  
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There are 158 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb411150_T002 from maize genome v5

Amino Acid Sequence
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MDGGAGFPGTPVPRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKDNLCLYGLPNETWEVNLPAEEVPPELPEPAL
GINFARDGMNEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKESKEKTPKSSNKT
NKSGSKPSRQVEPNSRVPKMPPPKDEESEGEEGEPQEDHESALCGACGLGYDDFWICCDLCETWFHGKCVKITPNKAEHI
KQYKCPSCTGSKRAKA

MDGGAGFPGTPVPRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKDNLCLYGLPNETWEVNLPAEEVPPELPEPAL
GINFARDGMNEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKESKEKTPKSSNKT
NKSGSKPSRQVEPNSRVPKMPPPKDEESEGEEGEPQEDHESALCGACGLGYDDFWICCDLCETWFHGKCVKITPNKAEHI
KQYKCPSCTGSKRAKA

MDGGAGFPGTPVPRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKDNLCLYGLPNETWEVNLPAEEVPPELPEPAL
GINFARDGMNEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKESKEKTPKSSNKT
NKSGSKPSRQVEPNSRVPKMPPPKDEESEGEEGEPQEDHESALCGACGLGYDDFWICCDLCETWFHGKCVKITPNKAEHI
KQYKCPSCTGSKRAKA

MDGGAGFPGTPVPRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKDNLCLYGLPNETWEVNLPAEEVPPELPEPAL
GINFARDGMNEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKESKEKTPKSSNKT
NKSGSKPSRQVEPNSRVPKMPPPKDEESEGEEGEPQEDHESALCGACGLGYDDFWICCDLCETWFHGKCVKITPNKAEHI
KQYKCPSCTGSKRAKA

MDGGAGFPGTPVPRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKDNLCLYGLPNETWEVNLPAEEVPPELPEPAL
GINFARDGMNEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKESKEKTPKSSNKT
NKSGSKPSRQVEPNSRVPKMPPPKDEESEGEEGEPQEDHESALCGACGLGYDDFWICCDLCETWFHGKCVKITPNKAEHI
KQYKCPSCTGSKRAKA

MDGGAGFPGTPVPRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKDNLCLYGLPNETWEVNLPAEEVPPELPEPAL
GINFARDGMNEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKESKEKTPKSSNKT
NKSGSKPSRQVEPNSRVPKMPPPKDEESEGEEGEPQEDHESALCGACGLGYDDFWICCDLCETWFHGKCVKITPNKAEHI
KQYKCPSCTGSKRAKA

MDGGAGFPGTPVPRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKDNLCLYGLPNETWEVNLPAEEVPPELPEPAL
GINFARDGMNEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKESKEKTPKSSNKT
NKSGSKPSRQVEPNSRVPKMPPPKDEESEGEEGEPQEDHESALCGACGLGYDDFWICCDLCETWFHGKCVKITPNKAEHI
KQYKCPSCTGSKRAKA

MDGGAGFPGTPVPRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKDNLCLYGLPNETWEVNLPAEEVPPELPEPAL
GINFARDGMNEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKESKEKTPKSSNKT
NKSGSKPSRQVEPNSRVPKMPPPKDEESEGEEGEPQEDHESALCGACGLGYDDFWICCDLCETWFHGKCVKITPNKAEHI
KQYKCPSCTGSKRAKA

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF12165
PF00628
PF00628
Alfin-like
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Nucleotide Sequence
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TGCGGCTGCGCCTGCGCCCGACCAA...

GRMZM2G115424_T01 from maize genome v3

Amino Acid Sequence
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MINNLPSIYEVVTGTAKKESKEKTPKSSNKTNKSGSKPSRQVEPNSRVPKMPPPKDEESEGEEGEPQEDHESALCGACGL
GYDDFWICCDLCETWFHGKCVKITPNKAEHIKQYKCPSCTGSKRAKA

Nucleotide Sequence
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AATTTTCTTTGTATAACTAAAGCAG...

GRMZM2G115424_T02 from maize genome v3

Amino Acid Sequence
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MDGGAGFPGTPVPRSPEDVFRDYRARQAGLIRALTTEKDNLCLYGLPNETWEVNLPAEEVPPELPEPALGINFARDGMNE
KDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKESKEKTPKSSNKTNKSGSKPSRQV
EPNSRVPKMPPPKDEESEGEEGEPQEDHESALCGACGLGYDDFWICCDLCETWFHGKCVKITPNKAEHIKQYKCPSCTGS
KRAKA

Nucleotide Sequence
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CAAATAGGGCCGCAAACTATCGGAC...

GRMZM2G115424_T03 from maize genome v3


Related TFome: pUT6662

Amino Acid Sequence
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MDGGAGFPGTPVPRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKDNLCLYGLPNETWEVNLPAEEVPPELPEPAL
GINFARDGMNEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKESKEKTPKSSNKT
NKSGSKPSRQVEPNSRVPKMPPPKDEESEGEEGEPQEDHESALCGACGLGYDDFWICCDLCETWFHGKCVKITPNKAEHI
KQYKCPSCTGSKRAKA

Nucleotide Sequence
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TCGGACTCATTGGAAGGCCCGCGAC...

Zm00001d023962_T001 from maize genome v4

Amino Acid Sequence
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MDGGAGFPGTPVPRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKDNLCLYGLPNETWEVNLPAEEVPPELPEPAL
GINFARDGMNEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRACIVRVLGFISRLKTMFLLPTNTWTYNYKILVQVDA
RWWQLSAILGVVSLLRKRLFTMINNLPSIYEVVTGTAKKESKEKTPKSSNKTNKSGSKPSRQVEPNSRVPKMPPPKDEES
EGEEGEPQEDHESALCGACGLGYDDFWICCDLCETWFHGKCVKITPNKAEHIKQYKCPSCTGSKRAKA

Nucleotide Sequence
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AGTGCCGTGCCAAATAGGGCCGCAA...

Zm00001d023962_T002 from maize genome v4

Amino Acid Sequence
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MDGGAGFPGTPVPRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKDNLCLYGLPNETWEVNLPAEEVPPELPEPAL
GINFARDGMNEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRYPFVLL

Nucleotide Sequence
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GCGCCCGACCAAACGTAGGAGACCC...

Zm00001d023962_T003 from maize genome v4

Amino Acid Sequence
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MDGGAGFPGTPVPRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKDNLCLYGLPNETWEVNLPAEEVPPELPEPAL
GINFARDGMNEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKESKEKTPKSSNKT
NKSGSKPSRQVEPNSRVPKMPPPKDEESEGEEGEPQEDHESALCGACGLGYDDFWICCDLCETWFHGKCVKITPNKAEHI
KQYKCPSCTGSKRAKA

Nucleotide Sequence
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AGTGCCGTGCCAAATAGGGCCGCAA...

Zm00001d023962_T004 from maize genome v4

Amino Acid Sequence
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MDGGAGFPGTPVPRSPEDVFRDYRARQAGLIRALTTEKDNLCLYGLPNETWEVNLPAEEVPPELPEPALGINFARDGMNE
KDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKESKEKTPKSSNKTNKSGSKPSRQV
EPNSRVPKMPPPKDEESEGEEGEPQEDHESALCGACGLGYDDFWICCDLCETWFHGKCVKITPNKAEHIKQYKCPSCTGS
KRAKA

Nucleotide Sequence
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GTCTCAGCGCCGACGCTTCCCAACT...

Zm00001d023962_T005 from maize genome v4

Amino Acid Sequence
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MINNLPSIYEVVTGTAKKESKEKTPKSSNKTNKSGSKPSRQVEPNSRVPKMPPPKDEESEGEEGEPQEDHESALCGACGL
GYDDFWICCDLCETWFHGKCVKITPNKAEHIKQYKCPSCTGSKRAKA

Nucleotide Sequence
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AGTGCCGTGCCAAATAGGGCCGCAA...

Zm00001d023962_T006 from maize genome v4

Amino Acid Sequence
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MDGGAGFPGTPVPRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKDNLCLYGLPNETWEVNLPAEEVPPELPEPAL
GINFARDGMNEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKESKEKTPKSSNKT
NKSGSKPSRQVEPNSRVPKMPPPKDEESEGEEGEPQEDHESALCGACGLGYDDFWICCDLCETWFHGKCVKITPNKAEHI
KQYKCPSCTGSKRAKA

Nucleotide Sequence
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TCTTCTCTGTCTCAGCGCCGACGCT...

Zm00001d023962_T007 from maize genome v4

Amino Acid Sequence
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MDGGAGFPGTPVPRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKDNLCLYGLPNETWEVNLPAEEVPPELPEPAL
GINFARDGMNEKDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRACIVRVLGFISRLKTMFLLPTNTWTYNYKILVQVDA
RWWQLSAILGVVSLLRKRLFTMINNLPSIYEVVTGTAKKESKEKTPKSSNKTNKSGSKPSRQVEPNSRVPKMPPPKDEES
EGEEGEPQEDHESALCGACGLGYDDFWICCDLCETWFHGKCVKITPNKAEHIKQYKCPSCTGSKRAKA

Nucleotide Sequence
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AGTGCCGTGCCAAATAGGGCCGCAA...

Zm00001eb411150_T001 from maize genome v5

Amino Acid Sequence
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MDGGAGFPGTPVPRSPEDVFRDYRARQAGLIRALTTEKDNLCLYGLPNETWEVNLPAEEVPPELPEPALGINFARDGMNE
KDWLSLVAVHSDSWLMSVAFYFGARFGFDKESRKRLFTMINNLPSIYEVVTGTAKKESKEKTPKSSNKTNKSGSKPSRQV
EPNSRVPKMPPPKDEESEGEEGEPQEDHESALCGACGLGYDDFWICCDLCETWFHGKCVKITPNKAEHIKQYKCPSCTGS
KRAKA

Nucleotide Sequence
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CAAATAGGGCCGCAAACTATCGGAC...

Zm00001eb411150_T003 from maize genome v5

Amino Acid Sequence
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MGVNFRKRLFTMINNLPSIYEVVTGTAKKESKEKTPKSSNKTNKSGSKPSRQVEPNSRVPKMPPPKDEESEGEEGEPQED
HESALCGACGLGYDDFWICCDLCETWFHGKCVKITPNKAEHIKQYKCPSCTGSKRAKA

Nucleotide Sequence
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CAACTCCTTCCAATCGATTCTTCGT...

Zm00001eb411150_T004 from maize genome v5

Amino Acid Sequence
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MINNLPSIYEVVTGTAKKESKEKTPKSSNKTNKSGSKPSRQVEPNSRVPKMPPPKDEESEGEEGEPQEDHESALCGACGL
GYDDFWICCDLCETWFHGKCVKITPNKAEHIKQYKCPSCTGSKRAKA

Nucleotide Sequence
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AATTTTCTTTGTATAACTAAAGCAG...


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